Integrated annotated Human normal Protein (IHP) Browser
Detalied information of IHP
Name
ENSP00000353540
Comment
Origin of IHP
|
Gene Origins
|
Interpro Annotation
IPR008403 (12.00): Apolipoprotein CIII (1~99)
noIPR (12.00): (4~47) (48~82)
IPR008403 (18.00): Apolipoprotein CIII (1~99)
noIPR (18.00): (4~29) (31~89)
10 Mutated sequence(s)
| Name | Length (aa) | Type |
| IMS000326 | 18 | Stop |
| IMS017282 | 99 | Point |
| IMS017283 | 99 | Point |
| IMS020003 | 99 | Point ,Point |
| IMS020004 | 99 | Others |
| IMS020005 | 99 | Point |
| IMS020006 | 99 | Point |
| IMS044563 | 99 | Others ,Point ,Point |
| IMS058981 | 99 | Point |
| IMS141136 | 99 | Point |
Amino acid length
99 aa
Amino acid sequence viewer
| |......10|.......20|.......30|.......40|.......50|.......60|.......70|.......80| | |
| + 1 81 |
MQPRVLLVVALLALLASARASEAEDASLLSFMQGYMKHATKTAKDALSSVQESQVAQQARGWVTDGFSSLKDYWSTVKDK FSEFWDLDPEVRPTSAVAA |
cDNA sequence length
533 bp
cDNA sequence viewer
| |......10|.......20|.......30|.......40|.......50|.......60|.......70|.......80| | |
| + 1 81 161 241 321 401 481 |
TGCTCAGTTCATCCCTAGAGGCAGCTGCTCCAGGAACAGAGGTGCCATGCAGCCCCGGGTACTCCTTGTTGTTGCCCTCC TGGCGCTCCTGGCCTCTGCCCGAGCTTCAGAGGCCGAGGATGCCTCCCTTCTCAGCTTCATGCAGGGCTACATGAAGCAC GCCACCAAGACCGCCAAGGATGCACTGAGCAGCGTGCAGGAGTCCCAGGTGGCCCAGCAGGCCAGGGGCTGGGTGACCGA TGGCTTCAGTTCCCTGAAAGACTACTGGAGCACCGTTAAGGACAAGTTCTCTGAGTTCTGGGATTTGGACCCTGAGGTCA GACCAACTTCAGCCGTGGCTGCCTGAGACCTCAATACCCCAAGTCCACCTGCCTATCCATCCTGCCAGCTCCTTGGGTCC TGCAATCTCCAGGGCTTCCCCTGTAGGTTGCTTAAAAGGGACAGTATTCTCAGTGCTCTCCTACCCCACCTCATGCCTGG CCCCCCTCCAGGCATGCTGGCCTCCCAATAAAGCTGGACAAGAAGCTGCTATG |
Codon usage
| 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 12 | 13 | 14 | 15 |
| M | Q | P | R | V | L | L | V | V | A | L | L | A | L | L |
| TGC | TCA | GTT | CAT | CCC | TAG | AGG | CAG | CTG | CTC | CAG | GAA | CAG | AGG | TGC |
| 16 | 17 | 18 | 19 | 20 | 21 | 22 | 23 | 24 | 25 | 26 | 27 | 28 | 29 | 30 |
| A | S | A | R | A | S | E | A | E | D | A | S | L | L | S |
| CAT | GCA | GCC | CCG | GGT | ACT | CCT | TGT | TGT | TGC | CCT | CCT | GGC | GCT | CCT |
| 31 | 32 | 33 | 34 | 35 | 36 | 37 | 38 | 39 | 40 | 41 | 42 | 43 | 44 | 45 |
| F | M | Q | G | Y | M | K | H | A | T | K | T | A | K | D |
| GGC | CTC | TGC | CCG | AGC | TTC | AGA | GGC | CGA | GGA | TGC | CTC | CCT | TCT | CAG |
| 46 | 47 | 48 | 49 | 50 | 51 | 52 | 53 | 54 | 55 | 56 | 57 | 58 | 59 | 60 |
| A | L | S | S | V | Q | E | S | Q | V | A | Q | Q | A | R |
| CTT | CAT | GCA | GGG | CTA | CAT | GAA | GCA | CGC | CAC | CAA | GAC | CGC | CAA | GGA |
| 61 | 62 | 63 | 64 | 65 | 66 | 67 | 68 | 69 | 70 | 71 | 72 | 73 | 74 | 75 |
| G | W | V | T | D | G | F | S | S | L | K | D | Y | W | S |
| TGC | ACT | GAG | CAG | CGT | GCA | GGA | GTC | CCA | GGT | GGC | CCA | GCA | GGC | CAG |
| 76 | 77 | 78 | 79 | 80 | 81 | 82 | 83 | 84 | 85 | 86 | 87 | 88 | 89 | 90 |
| T | V | K | D | K | F | S | E | F | W | D | L | D | P | E |
| GGG | CTG | GGT | GAC | CGA | TGG | CTT | CAG | TTC | CCT | GAA | AGA | CTA | CTG | GAG |
| 91 | 92 | 93 | 94 | 95 | 96 | 97 | 98 | 99 | ||||||
| V | R | P | T | S | A | V | A | A | ||||||
| CAC | CGT | TAA | GGA | CAA | GTT | CTC | TGA | GTT |
