Integrated annotated Human normal Protein (IHP) Browser
Detalied information of IHP
Name
ENSP00000227666
Comment
Origin of IHP
|
Gene Origins
|
Interpro Annotation
IPR000074 (12.00): Apolipoprotein A1/A4/E (4~377)
IPR000074 (18.00): Apolipoprotein A1/A4/E (60~328)
IPR013326 (18.00): Apolipoprotein/apolipophorin (20~159) (161~228) (231~294) (296~357)
noIPR (18.00): (2~167) (168~396)
25 Mutated sequence(s)
| Name | Length (aa) | Type |
| IMS017280 | 396 | Point |
| IMS017281 | 396 | Point |
| IMS043423 | 384 | Deletion |
| IMS043424 | 347 | Deletion |
| IMS043425 | 341 | Deletion |
| IMS043426 | 352 | Deletion |
| IMS043427 | 352 | Deletion |
| IMS043428 | 352 | Deletion |
| IMS043429 | 356 | Deletion |
| IMS043430 | 352 | Deletion |
| IMS043440 | 396 | Point |
| IMS051773 | 396 | Point |
| IMS051774 | 396 | Others |
| IMS079388 | 396 | Point |
| IMS079389 | 396 | Point |
| IMS079390 | 396 | Point |
| IMS079391 | 396 | Point |
| IMS079392 | 396 | Point |
| IMS079393 | 396 | Point |
| IMS079394 | 396 | Point |
| IMS079395 | 396 | Point |
| IMS079396 | 396 | Point |
| IMS079397 | 396 | Point |
| IMS079398 | 396 | Point |
| IMS188203 | 396 | Point |
Amino acid length
396 aa
Amino acid sequence viewer
| |......10|.......20|.......30|.......40|.......50|.......60|.......70|.......80| | |
| + 1 81 161 241 321 |
MFLKAVVLTLALVAVAGARAEVSADQVATVMWDYFSQLSNNAKEAVEHLQKSELTQQLNALFQDKLGEVNTYAGDLQKKL VPFATELHERLAKDSEKLKEEIGKELEELRARLLPHANEVSQKIGDNLRELQQRLEPYADQLRTQVNTQAEQLRRQLTPY AQRMERVLRENADSLQASLRPHADELKAKIDQNVEELKGRLTPYADEFKVKIDQTVEELRRSLAPYAQDTQEKLNHQLEG LTFQMKKNAEELKARISASAEELRQRLAPLAEDVRGNLRGNTEGLQKSLAELGGHLDQQVEEFRRRVEPYGENFNKALVQ QMEQLRQKLGPHAGDVEGHLSFLEKDLRDKVNSFFSTFKEKESQDKTLSLPELEQQQEQQQEQQQEQVQMLAPLES |
cDNA sequence length
1456 bp
cDNA sequence viewer
| |......10|.......20|.......30|.......40|.......50|.......60|.......70|.......80| | |
| + 1 81 161 241 321 401 481 561 641 721 801 881 961 1041 1121 1201 1281 1361 1441 |
TGCAGCGCAGGTGAGCTCTCCTGAGGACCTCTCTGTCAGCTCCCCTGATTGTAGGGAGGATCCAGTGTGGCAAGAAACTC CTCCAGCCCAGCAAGCAGCTCAGGATGTTCCTGAAGGCCGTGGTCCTGACCCTGGCCCTGGTGGCTGTCGCCGGAGCCAG GGCTGAGGTCAGTGCTGACCAGGTGGCCACAGTGATGTGGGACTACTTCAGCCAGCTGAGCAACAATGCCAAGGAGGCCG TGGAACATCTCCAGAAATCTGAACTCACCCAGCAACTCAATGCCCTCTTCCAGGACAAACTTGGAGAAGTGAACACTTAC GCAGGTGACCTGCAGAAGAAGCTGGTGCCCTTTGCCACCGAGCTGCATGAACGCCTGGCCAAGGACTCGGAGAAACTGAA GGAGGAGATTGGGAAGGAGCTGGAGGAGCTGAGGGCCCGGCTGCTGCCCCATGCCAATGAGGTGAGCCAGAAGATCGGGG ACAACCTGCGAGAGCTTCAGCAGCGCCTGGAGCCCTACGCGGACCAGCTGCGCACCCAGGTCAACACGCAGGCCGAGCAG CTGCGGCGCCAGCTGACCCCCTACGCACAGCGCATGGAGAGAGTGCTGCGGGAGAACGCCGACAGCCTGCAGGCCTCGCT GAGGCCCCACGCCGACGAGCTCAAGGCCAAGATCGACCAGAACGTGGAGGAGCTCAAGGGACGCCTTACGCCCTACGCTG ACGAATTCAAAGTCAAGATTGACCAGACCGTGGAGGAGCTGCGCCGCAGCCTGGCTCCCTATGCTCAGGACACGCAGGAG AAGCTCAACCACCAGCTTGAGGGCCTGACCTTCCAGATGAAGAAGAACGCCGAGGAGCTCAAGGCCAGGATCTCGGCCAG TGCCGAGGAGCTGCGGCAGAGGCTGGCGCCCTTGGCCGAGGACGTGCGTGGCAACCTGAGGGGCAACACCGAGGGGCTGC AGAAGTCACTGGCAGAGCTGGGTGGGCACCTGGACCAGCAGGTGGAGGAGTTCCGACGCCGGGTGGAGCCCTACGGGGAA AACTTCAACAAAGCCCTGGTGCAGCAGATGGAACAGCTCAGGCAGAAACTGGGCCCCCATGCGGGGGACGTGGAAGGCCA CTTGAGCTTCCTGGAGAAGGACCTGAGGGACAAGGTCAACTCCTTCTTCAGCACCTTCAAGGAGAAAGAGAGCCAGGACA AGACTCTCTCCCTCCCTGAGCTGGAGCAACAGCAGGAACAGCAGCAGGAGCAGCAGCAGGAGCAGGTGCAGATGCTGGCC CCTTTGGAGAGCTGAGCTGCCCCTGGTGCACTGGCCCCACCCTCGTGGACACCTGCCCTGCCCTGCCACCTGTCTGTCTG TCCCAAAGAAGTTCTGGTATGAACTTGAGGACACATGTCCAGTGGGAGGTGAGACCACCTCTCAATATTCAATAAAGCTG CTGAGAATCTAGCCTC |
Codon usage
| 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 12 | 13 | 14 | 15 |
| M | F | L | K | A | V | V | L | T | L | A | L | V | A | V |
| TGC | AGC | GCA | GGT | GAG | CTC | TCC | TGA | GGA | CCT | CTC | TGT | CAG | CTC | CCC |
| 16 | 17 | 18 | 19 | 20 | 21 | 22 | 23 | 24 | 25 | 26 | 27 | 28 | 29 | 30 |
| A | G | A | R | A | E | V | S | A | D | Q | V | A | T | V |
| TGA | TTG | TAG | GGA | GGA | TCC | AGT | GTG | GCA | AGA | AAC | TCC | TCC | AGC | CCA |
| 31 | 32 | 33 | 34 | 35 | 36 | 37 | 38 | 39 | 40 | 41 | 42 | 43 | 44 | 45 |
| M | W | D | Y | F | S | Q | L | S | N | N | A | K | E | A |
| GCA | AGC | AGC | TCA | GGA | TGT | TCC | TGA | AGG | CCG | TGG | TCC | TGA | CCC | TGG |
| 46 | 47 | 48 | 49 | 50 | 51 | 52 | 53 | 54 | 55 | 56 | 57 | 58 | 59 | 60 |
| V | E | H | L | Q | K | S | E | L | T | Q | Q | L | N | A |
| CCC | TGG | TGG | CTG | TCG | CCG | GAG | CCA | GGG | CTG | AGG | TCA | GTG | CTG | ACC |
| 61 | 62 | 63 | 64 | 65 | 66 | 67 | 68 | 69 | 70 | 71 | 72 | 73 | 74 | 75 |
| L | F | Q | D | K | L | G | E | V | N | T | Y | A | G | D |
| AGG | TGG | CCA | CAG | TGA | TGT | GGG | ACT | ACT | TCA | GCC | AGC | TGA | GCA | ACA |
| 76 | 77 | 78 | 79 | 80 | 81 | 82 | 83 | 84 | 85 | 86 | 87 | 88 | 89 | 90 |
| L | Q | K | K | L | V | P | F | A | T | E | L | H | E | R |
| ATG | CCA | AGG | AGG | CCG | TGG | AAC | ATC | TCC | AGA | AAT | CTG | AAC | TCA | CCC |
| 91 | 92 | 93 | 94 | 95 | 96 | 97 | 98 | 99 | 100 | 101 | 102 | 103 | 104 | 105 |
| L | A | K | D | S | E | K | L | K | E | E | I | G | K | E |
| AGC | AAC | TCA | ATG | CCC | TCT | TCC | AGG | ACA | AAC | TTG | GAG | AAG | TGA | ACA |
| 106 | 107 | 108 | 109 | 110 | 111 | 112 | 113 | 114 | 115 | 116 | 117 | 118 | 119 | 120 |
| L | E | E | L | R | A | R | L | L | P | H | A | N | E | V |
| CTT | ACG | CAG | GTG | ACC | TGC | AGA | AGA | AGC | TGG | TGC | CCT | TTG | CCA | CCG |
| 121 | 122 | 123 | 124 | 125 | 126 | 127 | 128 | 129 | 130 | 131 | 132 | 133 | 134 | 135 |
| S | Q | K | I | G | D | N | L | R | E | L | Q | Q | R | L |
| AGC | TGC | ATG | AAC | GCC | TGG | CCA | AGG | ACT | CGG | AGA | AAC | TGA | AGG | AGG |
| 136 | 137 | 138 | 139 | 140 | 141 | 142 | 143 | 144 | 145 | 146 | 147 | 148 | 149 | 150 |
| E | P | Y | A | D | Q | L | R | T | Q | V | N | T | Q | A |
| AGA | TTG | GGA | AGG | AGC | TGG | AGG | AGC | TGA | GGG | CCC | GGC | TGC | TGC | CCC |
| 151 | 152 | 153 | 154 | 155 | 156 | 157 | 158 | 159 | 160 | 161 | 162 | 163 | 164 | 165 |
| E | Q | L | R | R | Q | L | T | P | Y | A | Q | R | M | E |
| ATG | CCA | ATG | AGG | TGA | GCC | AGA | AGA | TCG | GGG | ACA | ACC | TGC | GAG | AGC |
| 166 | 167 | 168 | 169 | 170 | 171 | 172 | 173 | 174 | 175 | 176 | 177 | 178 | 179 | 180 |
| R | V | L | R | E | N | A | D | S | L | Q | A | S | L | R |
| TTC | AGC | AGC | GCC | TGG | AGC | CCT | ACG | CGG | ACC | AGC | TGC | GCA | CCC | AGG |
| 181 | 182 | 183 | 184 | 185 | 186 | 187 | 188 | 189 | 190 | 191 | 192 | 193 | 194 | 195 |
| P | H | A | D | E | L | K | A | K | I | D | Q | N | V | E |
| TCA | ACA | CGC | AGG | CCG | AGC | AGC | TGC | GGC | GCC | AGC | TGA | CCC | CCT | ACG |
| 196 | 197 | 198 | 199 | 200 | 201 | 202 | 203 | 204 | 205 | 206 | 207 | 208 | 209 | 210 |
| E | L | K | G | R | L | T | P | Y | A | D | E | F | K | V |
| CAC | AGC | GCA | TGG | AGA | GAG | TGC | TGC | GGG | AGA | ACG | CCG | ACA | GCC | TGC |
| 211 | 212 | 213 | 214 | 215 | 216 | 217 | 218 | 219 | 220 | 221 | 222 | 223 | 224 | 225 |
| K | I | D | Q | T | V | E | E | L | R | R | S | L | A | P |
| AGG | CCT | CGC | TGA | GGC | CCC | ACG | CCG | ACG | AGC | TCA | AGG | CCA | AGA | TCG |
| 226 | 227 | 228 | 229 | 230 | 231 | 232 | 233 | 234 | 235 | 236 | 237 | 238 | 239 | 240 |
| Y | A | Q | D | T | Q | E | K | L | N | H | Q | L | E | G |
| ACC | AGA | ACG | TGG | AGG | AGC | TCA | AGG | GAC | GCC | TTA | CGC | CCT | ACG | CTG |
| 241 | 242 | 243 | 244 | 245 | 246 | 247 | 248 | 249 | 250 | 251 | 252 | 253 | 254 | 255 |
| L | T | F | Q | M | K | K | N | A | E | E | L | K | A | R |
| ACG | AAT | TCA | AAG | TCA | AGA | TTG | ACC | AGA | CCG | TGG | AGG | AGC | TGC | GCC |
| 256 | 257 | 258 | 259 | 260 | 261 | 262 | 263 | 264 | 265 | 266 | 267 | 268 | 269 | 270 |
| I | S | A | S | A | E | E | L | R | Q | R | L | A | P | L |
| GCA | GCC | TGG | CTC | CCT | ATG | CTC | AGG | ACA | CGC | AGG | AGA | AGC | TCA | ACC |
| 271 | 272 | 273 | 274 | 275 | 276 | 277 | 278 | 279 | 280 | 281 | 282 | 283 | 284 | 285 |
| A | E | D | V | R | G | N | L | R | G | N | T | E | G | L |
| ACC | AGC | TTG | AGG | GCC | TGA | CCT | TCC | AGA | TGA | AGA | AGA | ACG | CCG | AGG |
| 286 | 287 | 288 | 289 | 290 | 291 | 292 | 293 | 294 | 295 | 296 | 297 | 298 | 299 | 300 |
| Q | K | S | L | A | E | L | G | G | H | L | D | Q | Q | V |
| AGC | TCA | AGG | CCA | GGA | TCT | CGG | CCA | GTG | CCG | AGG | AGC | TGC | GGC | AGA |
| 301 | 302 | 303 | 304 | 305 | 306 | 307 | 308 | 309 | 310 | 311 | 312 | 313 | 314 | 315 |
| E | E | F | R | R | R | V | E | P | Y | G | E | N | F | N |
| GGC | TGG | CGC | CCT | TGG | CCG | AGG | ACG | TGC | GTG | GCA | ACC | TGA | GGG | GCA |
| 316 | 317 | 318 | 319 | 320 | 321 | 322 | 323 | 324 | 325 | 326 | 327 | 328 | 329 | 330 |
| K | A | L | V | Q | Q | M | E | Q | L | R | Q | K | L | G |
| ACA | CCG | AGG | GGC | TGC | AGA | AGT | CAC | TGG | CAG | AGC | TGG | GTG | GGC | ACC |
| 331 | 332 | 333 | 334 | 335 | 336 | 337 | 338 | 339 | 340 | 341 | 342 | 343 | 344 | 345 |
| P | H | A | G | D | V | E | G | H | L | S | F | L | E | K |
| TGG | ACC | AGC | AGG | TGG | AGG | AGT | TCC | GAC | GCC | GGG | TGG | AGC | CCT | ACG |
| 346 | 347 | 348 | 349 | 350 | 351 | 352 | 353 | 354 | 355 | 356 | 357 | 358 | 359 | 360 |
| D | L | R | D | K | V | N | S | F | F | S | T | F | K | E |
| GGG | AAA | ACT | TCA | ACA | AAG | CCC | TGG | TGC | AGC | AGA | TGG | AAC | AGC | TCA |
| 361 | 362 | 363 | 364 | 365 | 366 | 367 | 368 | 369 | 370 | 371 | 372 | 373 | 374 | 375 |
| K | E | S | Q | D | K | T | L | S | L | P | E | L | E | Q |
| GGC | AGA | AAC | TGG | GCC | CCC | ATG | CGG | GGG | ACG | TGG | AAG | GCC | ACT | TGA |
| 376 | 377 | 378 | 379 | 380 | 381 | 382 | 383 | 384 | 385 | 386 | 387 | 388 | 389 | 390 |
| Q | Q | E | Q | Q | Q | E | Q | Q | Q | E | Q | V | Q | M |
| GCT | TCC | TGG | AGA | AGG | ACC | TGA | GGG | ACA | AGG | TCA | ACT | CCT | TCT | TCA |
| 391 | 392 | 393 | 394 | 395 | 396 | |||||||||
| L | A | P | L | E | S | |||||||||
| GCA | CCT | TCA | AGG | AGA | AAG |
